Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 AC009474.1-201ENST00000455096 1565 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 AP000437.1-201ENST00000624057 2085 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 PDIA3P1-201ENST00000471856 1510 ntBASIC12.8□□□□□ -0.36
LRRC28Q86X40 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 RNU1-114P-201ENST00000365297 166 ntBASIC12.8□□□□□ -0.36
LRRC28Q86X40 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 ACTBP8-201ENST00000403258 1108 ntBASIC12.8□□□□□ -0.36
LRRC28Q86X40 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 KLF2P4-201ENST00000451959 1225 ntBASIC12.8□□□□□ -0.36
LRRC28Q86X40 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 FTH1P14-201ENST00000482930 551 ntBASIC12.8□□□□□ -0.36
LRRC28Q86X40 AC106760.1-201ENST00000508690 800 ntBASIC12.8□□□□□ -0.36
LRRC28Q86X40 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 AC145423.3-201ENST00000615987 467 ntBASIC12.8□□□□□ -0.36
LRRC28Q86X40 MIR6775-201ENST00000617557 69 ntBASIC12.8□□□□□ -0.36
LRRC28Q86X40 MIR6752-201ENST00000618442 71 ntBASIC12.8□□□□□ -0.36
LRRC28Q86X40 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 AC015688.4-201ENST00000580780 1647 ntBASIC12.8□□□□□ -0.36
LRRC28Q86X40 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
LRRC28Q86X40 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRC28Q86X40 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LRRC28Q86X40 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRC28Q86X40 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms