Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 MPV17-209ENST00000405983 859 ntTSL 5 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 CD37-203ENST00000426897 1204 ntTSL 2 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 RPL29P2-201ENST00000488409 460 ntBASIC17.54■□□□□ 0.4
RC3H1Q5TC82 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 RNA5SP420-201ENST00000516997 137 ntBASIC17.54■□□□□ 0.4
RC3H1Q5TC82 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 CR392039.1-201ENST00000623217 204 ntBASIC17.54■□□□□ 0.4
RC3H1Q5TC82 AC245369.7-201ENST00000631386 350 ntBASIC17.54■□□□□ 0.4
RC3H1Q5TC82 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 HSPA8P5-201ENST00000456928 2069 ntBASIC17.54■□□□□ 0.4
RC3H1Q5TC82 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RC3H1Q5TC82 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 AC113367.3-201ENST00000508316 1912 ntBASIC17.53■□□□□ 0.4
RC3H1Q5TC82 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 HNRNPA1P10-201ENST00000444945 962 ntBASIC17.53■□□□□ 0.4
RC3H1Q5TC82 PEBP1P3-201ENST00000455475 548 ntBASIC17.53■□□□□ 0.4
RC3H1Q5TC82 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 AC004923.3-201ENST00000527532 355 ntBASIC17.53■□□□□ 0.4
RC3H1Q5TC82 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 PHBP18-201ENST00000546648 813 ntBASIC17.53■□□□□ 0.4
RC3H1Q5TC82 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 AC137723.2-201ENST00000623540 398 ntBASIC17.53■□□□□ 0.4
RC3H1Q5TC82 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.53■□□□□ 0.4
RC3H1Q5TC82 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 AC046158.3-201ENST00000624947 2558 ntBASIC17.52■□□□□ 0.4
RC3H1Q5TC82 RCC2P1-201ENST00000452257 1476 ntBASIC17.52■□□□□ 0.4
RC3H1Q5TC82 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 RN7SL578P-201ENST00000477781 283 ntBASIC17.52■□□□□ 0.4
RC3H1Q5TC82 ALG1L15P-201ENST00000482834 794 ntBASIC17.52■□□□□ 0.4
RC3H1Q5TC82 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 AC005746.3-201ENST00000614751 393 ntBASIC17.52■□□□□ 0.4
RC3H1Q5TC82 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 KRT8P38-201ENST00000441370 1430 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms