Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC025183.3-201ENST00000623526 1482 ntBASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC009093.10-201ENST00000641956 1442 ntBASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC089987.1-201ENST00000551654 2209 ntBASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 MRPL37P1-201ENST00000592451 1337 ntBASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 CICP20-201ENST00000443330 2801 ntBASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 MIR645-201ENST00000385283 94 ntBASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 ST13P19-201ENST00000442505 1124 ntBASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 AC244197.1-201ENST00000456494 951 ntBASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 RN7SL23P-201ENST00000484055 275 ntBASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 OR5BD1P-201ENST00000532527 817 ntBASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 AC226150.1-201ENST00000544259 466 ntBASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CTC1Q2NKJ3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms