Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDH1Q08174 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDH1Q08174 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
PCDH1Q08174 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDH1Q08174 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
PCDH1Q08174 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.8□□□□□ -0.2
PCDH1Q08174 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
PCDH1Q08174 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
PCDH1Q08174 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
PCDH1Q08174 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDH1Q08174 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.8□□□□□ -0.2
PCDH1Q08174 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 CICP17-201ENST00000418553 2377 ntBASIC13.8□□□□□ -0.2
PCDH1Q08174 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDH1Q08174 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDH1Q08174 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.8□□□□□ -0.2
PCDH1Q08174 AC021723.1-201ENST00000486306 515 ntBASIC13.8□□□□□ -0.2
PCDH1Q08174 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.8□□□□□ -0.2
PCDH1Q08174 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDH1Q08174 AC008805.1-201ENST00000590892 364 ntBASIC13.8□□□□□ -0.2
PCDH1Q08174 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.8□□□□□ -0.2
PCDH1Q08174 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.8□□□□□ -0.2
PCDH1Q08174 CR392039.2-201ENST00000623182 509 ntBASIC13.8□□□□□ -0.2
PCDH1Q08174 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 MARK2P9-201ENST00000430958 1727 ntBASIC13.8□□□□□ -0.2
PCDH1Q08174 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.8□□□□□ -0.2
PCDH1Q08174 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 DMBT1P1-203ENST00000636837 4628 ntBASIC13.8□□□□□ -0.2
PCDH1Q08174 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PCDH1Q08174 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 LINC01815-202ENST00000641468 1409 ntBASIC13.8□□□□□ -0.2
PCDH1Q08174 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PCDH1Q08174 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
PCDH1Q08174 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.8□□□□□ -0.2
PCDH1Q08174 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDH1Q08174 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.79□□□□□ -0.2
PCDH1Q08174 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PCDH1Q08174 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PCDH1Q08174 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.79□□□□□ -0.2
PCDH1Q08174 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PCDH1Q08174 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.79□□□□□ -0.2
PCDH1Q08174 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.79□□□□□ -0.2
PCDH1Q08174 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.79□□□□□ -0.2
PCDH1Q08174 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.79□□□□□ -0.2
PCDH1Q08174 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC13.79□□□□□ -0.2
PCDH1Q08174 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.79□□□□□ -0.2
PCDH1Q08174 RNMTL1P1-201ENST00000454103 560 ntBASIC13.79□□□□□ -0.2
PCDH1Q08174 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.79□□□□□ -0.2
PCDH1Q08174 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.79□□□□□ -0.2
PCDH1Q08174 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.79□□□□□ -0.2
PCDH1Q08174 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC13.79□□□□□ -0.2
PCDH1Q08174 AC009779.1-201ENST00000551138 283 ntBASIC13.79□□□□□ -0.2
PCDH1Q08174 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.79□□□□□ -0.2
PCDH1Q08174 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PCDH1Q08174 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.79□□□□□ -0.2
PCDH1Q08174 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms