Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
VBP1P61758 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
VBP1P61758 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
VBP1P61758 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.83□□□□□ -0.36
VBP1P61758 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
VBP1P61758 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
VBP1P61758 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
VBP1P61758 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.83□□□□□ -0.36
VBP1P61758 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.83□□□□□ -0.36
VBP1P61758 AL139094.1-201ENST00000405549 1188 ntBASIC12.83□□□□□ -0.36
VBP1P61758 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.83□□□□□ -0.36
VBP1P61758 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.83□□□□□ -0.36
VBP1P61758 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.83□□□□□ -0.36
VBP1P61758 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.83□□□□□ -0.36
VBP1P61758 AC022616.1-201ENST00000518688 554 ntBASIC12.83□□□□□ -0.36
VBP1P61758 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.83□□□□□ -0.36
VBP1P61758 AC040169.1-201ENST00000565382 521 ntBASIC12.83□□□□□ -0.36
VBP1P61758 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.36
VBP1P61758 FAM197Y3-203ENST00000618346 717 ntBASIC12.83□□□□□ -0.36
VBP1P61758 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.83□□□□□ -0.36
VBP1P61758 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 AC026992.2-203ENST00000563004 2419 ntBASIC12.83□□□□□ -0.36
VBP1P61758 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 MAPK10-262ENST00000641051 5738 ntBASIC12.83□□□□□ -0.36
VBP1P61758 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
VBP1P61758 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
VBP1P61758 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.83□□□□□ -0.36
VBP1P61758 AC145098.2-201ENST00000623593 3026 ntBASIC12.83□□□□□ -0.36
VBP1P61758 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VBP1P61758 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.82□□□□□ -0.36
VBP1P61758 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 NUS1P3-201ENST00000423502 862 ntBASIC12.82□□□□□ -0.36
VBP1P61758 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
VBP1P61758 FAM58DP-201ENST00000428076 619 ntBASIC12.82□□□□□ -0.36
VBP1P61758 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.82□□□□□ -0.36
VBP1P61758 AL161932.2-201ENST00000435436 679 ntBASIC12.82□□□□□ -0.36
VBP1P61758 KRT18P3-201ENST00000451602 1288 ntBASIC12.82□□□□□ -0.36
VBP1P61758 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
VBP1P61758 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.82□□□□□ -0.36
VBP1P61758 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.82□□□□□ -0.36
VBP1P61758 AL691432.3-201ENST00000621860 400 ntBASIC12.82□□□□□ -0.36
VBP1P61758 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
VBP1P61758 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 PRSS30P-206ENST00000641773 873 ntBASIC12.82□□□□□ -0.36
VBP1P61758 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 AL138725.1-201ENST00000407347 1314 ntBASIC12.82□□□□□ -0.36
VBP1P61758 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.82□□□□□ -0.36
VBP1P61758 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.82□□□□□ -0.36
VBP1P61758 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VBP1P61758 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VBP1P61758 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.82□□□□□ -0.36
VBP1P61758 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms