Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 AC087499.6-201ENST00000411576 835 ntBASIC12.36□□□□□ -0.43
ACTBP60709 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 VDAC1P7-201ENST00000462417 847 ntBASIC12.36□□□□□ -0.43
ACTBP60709 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.36□□□□□ -0.43
ACTBP60709 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 MIR4745-201ENST00000577608 62 ntBASIC12.36□□□□□ -0.43
ACTBP60709 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 RN7SL204P-201ENST00000582831 262 ntBASIC12.36□□□□□ -0.43
ACTBP60709 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 AC093726.1-201ENST00000608064 963 ntBASIC12.36□□□□□ -0.43
ACTBP60709 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 AC007431.3-201ENST00000623221 587 ntBASIC12.36□□□□□ -0.43
ACTBP60709 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.36□□□□□ -0.43
ACTBP60709 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 LRRC59-203ENST00000576448 1531 ntBASIC12.36□□□□□ -0.43
ACTBP60709 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 AC010970.1-201ENST00000445125 1848 ntBASIC12.35□□□□□ -0.43
ACTBP60709 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.35□□□□□ -0.43
ACTBP60709 AC236430.1-201ENST00000402231 743 ntBASIC12.35□□□□□ -0.43
ACTBP60709 AC002472.2-201ENST00000442739 958 ntBASIC12.35□□□□□ -0.43
ACTBP60709 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.35□□□□□ -0.43
ACTBP60709 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.35□□□□□ -0.43
ACTBP60709 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.35□□□□□ -0.43
ACTBP60709 AC027237.1-201ENST00000560942 655 ntBASIC12.35□□□□□ -0.43
ACTBP60709 AC005586.2-201ENST00000563946 837 ntBASIC12.35□□□□□ -0.43
ACTBP60709 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.35□□□□□ -0.43
ACTBP60709 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 ABCD1P2-201ENST00000429313 1601 ntBASIC12.35□□□□□ -0.43
ACTBP60709 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.35□□□□□ -0.43
ACTBP60709 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms