Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 AC087499.6-201ENST00000411576 835 ntBASIC12.36□□□□□ -0.43
ACTBP60709 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 VDAC1P7-201ENST00000462417 847 ntBASIC12.36□□□□□ -0.43
ACTBP60709 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.36□□□□□ -0.43
ACTBP60709 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 MIR4745-201ENST00000577608 62 ntBASIC12.36□□□□□ -0.43
ACTBP60709 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 RN7SL204P-201ENST00000582831 262 ntBASIC12.36□□□□□ -0.43
ACTBP60709 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 AC093726.1-201ENST00000608064 963 ntBASIC12.36□□□□□ -0.43
ACTBP60709 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 AC007431.3-201ENST00000623221 587 ntBASIC12.36□□□□□ -0.43
ACTBP60709 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.36□□□□□ -0.43
ACTBP60709 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.36□□□□□ -0.43
ACTBP60709 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 LRRC59-203ENST00000576448 1531 ntBASIC12.36□□□□□ -0.43
ACTBP60709 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 AC010970.1-201ENST00000445125 1848 ntBASIC12.35□□□□□ -0.43
ACTBP60709 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.35□□□□□ -0.43
ACTBP60709 AC236430.1-201ENST00000402231 743 ntBASIC12.35□□□□□ -0.43
ACTBP60709 AC002472.2-201ENST00000442739 958 ntBASIC12.35□□□□□ -0.43
ACTBP60709 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.35□□□□□ -0.43
ACTBP60709 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.35□□□□□ -0.43
ACTBP60709 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.35□□□□□ -0.43
ACTBP60709 AC027237.1-201ENST00000560942 655 ntBASIC12.35□□□□□ -0.43
ACTBP60709 AC005586.2-201ENST00000563946 837 ntBASIC12.35□□□□□ -0.43
ACTBP60709 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.35□□□□□ -0.43
ACTBP60709 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 ABCD1P2-201ENST00000429313 1601 ntBASIC12.35□□□□□ -0.43
ACTBP60709 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.35□□□□□ -0.43
ACTBP60709 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms