Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.36□□□□□ -0.27
PER3P56645 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PER3P56645 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.36□□□□□ -0.27
PER3P56645 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 ISCA2P1-201ENST00000425548 448 ntBASIC13.36□□□□□ -0.27
PER3P56645 AC079112.1-201ENST00000454972 939 ntBASIC13.36□□□□□ -0.27
PER3P56645 CEP164P1-201ENST00000455142 418 ntBASIC13.36□□□□□ -0.27
PER3P56645 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.36□□□□□ -0.27
PER3P56645 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.36□□□□□ -0.27
PER3P56645 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.36□□□□□ -0.27
PER3P56645 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
PER3P56645 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 AL031713.1-201ENST00000564813 661 ntBASIC13.36□□□□□ -0.27
PER3P56645 AC005324.6-201ENST00000587972 613 ntBASIC13.36□□□□□ -0.27
PER3P56645 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.36□□□□□ -0.27
PER3P56645 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.36□□□□□ -0.27
PER3P56645 AC073352.2-201ENST00000609385 439 ntBASIC13.36□□□□□ -0.27
PER3P56645 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
PER3P56645 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.36□□□□□ -0.27
PER3P56645 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PER3P56645 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PER3P56645 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PER3P56645 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 INTS4P1-203ENST00000641008 3683 ntBASIC13.35□□□□□ -0.27
PER3P56645 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PER3P56645 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.35□□□□□ -0.27
PER3P56645 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PER3P56645 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
PER3P56645 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.35□□□□□ -0.27
PER3P56645 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.35□□□□□ -0.27
PER3P56645 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.35□□□□□ -0.27
PER3P56645 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.35□□□□□ -0.27
PER3P56645 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 RPL7P35-201ENST00000446943 740 ntBASIC13.35□□□□□ -0.27
PER3P56645 AC116345.2-201ENST00000512837 523 ntBASIC13.35□□□□□ -0.27
PER3P56645 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PER3P56645 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.35□□□□□ -0.27
PER3P56645 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.35□□□□□ -0.27
PER3P56645 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.35□□□□□ -0.27
PER3P56645 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 AC004466.1-201ENST00000599515 1080 ntBASIC13.35□□□□□ -0.27
PER3P56645 AL132994.2-201ENST00000603120 687 ntBASIC13.35□□□□□ -0.27
PER3P56645 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.35□□□□□ -0.27
PER3P56645 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 AL162426.1-201ENST00000624141 743 ntBASIC13.35□□□□□ -0.27
PER3P56645 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
PER3P56645 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
PER3P56645 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PER3P56645 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
PER3P56645 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PER3P56645 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms