Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCR9P51686 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.63□□□□□ -0.39
CCR9P51686 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.63□□□□□ -0.39
CCR9P51686 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CCR9P51686 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.63□□□□□ -0.39
CCR9P51686 PIN1P1-201ENST00000412108 996 ntBASIC12.63□□□□□ -0.39
CCR9P51686 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.63□□□□□ -0.39
CCR9P51686 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 KRT18P15-201ENST00000458108 1291 ntBASIC12.63□□□□□ -0.39
CCR9P51686 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCR9P51686 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.63□□□□□ -0.39
CCR9P51686 AP003171.2-201ENST00000528208 925 ntBASIC12.63□□□□□ -0.39
CCR9P51686 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.63□□□□□ -0.39
CCR9P51686 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.63□□□□□ -0.39
CCR9P51686 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.63□□□□□ -0.39
CCR9P51686 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CCR9P51686 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.63□□□□□ -0.39
CCR9P51686 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCR9P51686 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CCR9P51686 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCR9P51686 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.63□□□□□ -0.39
CCR9P51686 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCR9P51686 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CCR9P51686 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.62□□□□□ -0.39
CCR9P51686 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CCR9P51686 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 MKRN5P-201ENST00000445263 1467 ntBASIC12.62□□□□□ -0.39
CCR9P51686 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 AL136309.1-201ENST00000403917 691 ntBASIC12.62□□□□□ -0.39
CCR9P51686 AC010141.1-201ENST00000411585 623 ntBASIC12.62□□□□□ -0.39
CCR9P51686 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 AL355864.2-201ENST00000447420 863 ntBASIC12.62□□□□□ -0.39
CCR9P51686 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 CYMP-203ENST00000474680 1263 ntBASIC12.62□□□□□ -0.39
CCR9P51686 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.62□□□□□ -0.39
CCR9P51686 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.62□□□□□ -0.39
CCR9P51686 AP001889.1-201ENST00000525414 633 ntBASIC12.62□□□□□ -0.39
CCR9P51686 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.62□□□□□ -0.39
CCR9P51686 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.62□□□□□ -0.39
CCR9P51686 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.62□□□□□ -0.39
CCR9P51686 WASH4P-201ENST00000564273 1246 ntBASIC12.62□□□□□ -0.39
CCR9P51686 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.62□□□□□ -0.39
CCR9P51686 GNRHR2-203ENST00000581100 1187 ntBASIC12.62□□□□□ -0.39
CCR9P51686 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.62□□□□□ -0.39
CCR9P51686 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CCR9P51686 LINC02560-201ENST00000596379 459 ntBASIC12.62□□□□□ -0.39
CCR9P51686 ECM1P1-201ENST00000604092 1279 ntBASIC12.62□□□□□ -0.39
CCR9P51686 RPSAP52-203ENST00000622976 1023 ntBASIC12.62□□□□□ -0.39
CCR9P51686 CR392039.2-201ENST00000623182 509 ntBASIC12.62□□□□□ -0.39
CCR9P51686 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.62□□□□□ -0.39
CCR9P51686 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.62□□□□□ -0.39
CCR9P51686 AL445209.1-201ENST00000607269 3491 ntBASIC12.62□□□□□ -0.39
CCR9P51686 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.62□□□□□ -0.39
CCR9P51686 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms