Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.65□□□□□ -0.38
SOX2P48431 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.65□□□□□ -0.38
SOX2P48431 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.65□□□□□ -0.38
SOX2P48431 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SOX2P48431 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.65□□□□□ -0.38
SOX2P48431 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.65□□□□□ -0.38
SOX2P48431 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.65□□□□□ -0.38
SOX2P48431 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.65□□□□□ -0.38
SOX2P48431 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 INGX-202ENST00000489074 768 ntBASIC12.65□□□□□ -0.38
SOX2P48431 SERBP1P5-201ENST00000510079 1181 ntBASIC12.65□□□□□ -0.38
SOX2P48431 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.38
SOX2P48431 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.65□□□□□ -0.38
SOX2P48431 CTBP2P3-201ENST00000585629 1255 ntBASIC12.65□□□□□ -0.38
SOX2P48431 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.65□□□□□ -0.38
SOX2P48431 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.65□□□□□ -0.38
SOX2P48431 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.65□□□□□ -0.38
SOX2P48431 AC004233.3-201ENST00000607794 1269 ntBASIC12.65□□□□□ -0.38
SOX2P48431 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SOX2P48431 WFDC1-204ENST00000613603 549 ntBASIC12.65□□□□□ -0.38
SOX2P48431 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SOX2P48431 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SOX2P48431 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.65□□□□□ -0.38
SOX2P48431 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SOX2P48431 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SOX2P48431 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 AL391825.1-201ENST00000457671 1364 ntBASIC12.65□□□□□ -0.38
SOX2P48431 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.65□□□□□ -0.38
SOX2P48431 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
SOX2P48431 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SOX2P48431 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SOX2P48431 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
SOX2P48431 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SOX2P48431 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SOX2P48431 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 AP000593.2-201ENST00000542775 1433 ntBASIC12.64□□□□□ -0.39
SOX2P48431 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SOX2P48431 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SOX2P48431 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SOX2P48431 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.64□□□□□ -0.39
SOX2P48431 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.64□□□□□ -0.39
SOX2P48431 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.64□□□□□ -0.39
SOX2P48431 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.64□□□□□ -0.39
SOX2P48431 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.64□□□□□ -0.39
SOX2P48431 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
SOX2P48431 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SOX2P48431 AC008494.3-201ENST00000606615 944 ntBASIC12.64□□□□□ -0.39
SOX2P48431 AC104506.1-201ENST00000609247 429 ntBASIC12.64□□□□□ -0.39
SOX2P48431 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.64□□□□□ -0.39
SOX2P48431 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.64□□□□□ -0.39
SOX2P48431 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SOX2P48431 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms