Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC104506.1-201ENST00000609247 429 ntBASIC11.77□□□□□ -0.53
NKX2-1P43699 BX088702.1-201ENST00000610784 235 ntBASIC11.77□□□□□ -0.53
NKX2-1P43699 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.77□□□□□ -0.53
NKX2-1P43699 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
NKX2-1P43699 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 ABCD1P2-201ENST00000429313 1601 ntBASIC11.77□□□□□ -0.53
NKX2-1P43699 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
NKX2-1P43699 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NKX2-1P43699 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.77□□□□□ -0.53
NKX2-1P43699 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
NKX2-1P43699 CES1P1-201ENST00000421606 1704 ntBASIC11.77□□□□□ -0.53
NKX2-1P43699 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.77□□□□□ -0.53
NKX2-1P43699 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NKX2-1P43699 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.76□□□□□ -0.53
NKX2-1P43699 C1QBPP1-201ENST00000400117 770 ntBASIC11.76□□□□□ -0.53
NKX2-1P43699 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.76□□□□□ -0.53
NKX2-1P43699 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.76□□□□□ -0.53
NKX2-1P43699 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.76□□□□□ -0.53
NKX2-1P43699 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.76□□□□□ -0.53
NKX2-1P43699 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.76□□□□□ -0.53
NKX2-1P43699 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 BRI3BPP1-201ENST00000594224 787 ntBASIC11.76□□□□□ -0.53
NKX2-1P43699 AL158211.3-201ENST00000607385 239 ntBASIC11.76□□□□□ -0.53
NKX2-1P43699 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.76□□□□□ -0.53
NKX2-1P43699 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
NKX2-1P43699 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
NKX2-1P43699 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-1P43699 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms