Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS2P33552 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS2P33552 AL596442.2-201ENST00000610240 980 ntBASIC10.56□□□□□ -0.72
CKS2P33552 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
CKS2P33552 GPER1-207ENST00000619052 571 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 PRSS30P-206ENST00000641773 873 ntBASIC10.56□□□□□ -0.72
CKS2P33552 GOLGA2P5-201ENST00000266746 2395 ntBASIC10.56□□□□□ -0.72
CKS2P33552 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 AC102953.2-201ENST00000609755 3026 ntBASIC10.56□□□□□ -0.72
CKS2P33552 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS2P33552 AC060814.4-201ENST00000594169 2163 ntBASIC10.56□□□□□ -0.72
CKS2P33552 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
CKS2P33552 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS2P33552 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 ABCD1P2-201ENST00000429313 1601 ntBASIC10.55□□□□□ -0.72
CKS2P33552 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC10.55□□□□□ -0.72
CKS2P33552 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 AL022323.5-201ENST00000624101 2059 ntBASIC10.55□□□□□ -0.72
CKS2P33552 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 RPS15-201ENST00000233609 534 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
CKS2P33552 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
CKS2P33552 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
CKS2P33552 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.55□□□□□ -0.72
CKS2P33552 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC10.55□□□□□ -0.72
CKS2P33552 AC026410.3-201ENST00000514280 936 ntBASIC10.55□□□□□ -0.72
CKS2P33552 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.55□□□□□ -0.72
CKS2P33552 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 RPS15-205ENST00000586686 562 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 RPS15-208ENST00000591804 711 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 AC107375.1-201ENST00000564464 2231 ntBASIC10.55□□□□□ -0.72
CKS2P33552 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.55□□□□□ -0.72
CKS2P33552 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 AC004623.1-201ENST00000624592 2127 ntBASIC10.55□□□□□ -0.72
CKS2P33552 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 AC131902.2-201ENST00000566892 2172 ntBASIC10.55□□□□□ -0.72
CKS2P33552 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CKS2P33552 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS2P33552 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS2P33552 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 PCDHB19P-202ENST00000625133 2914 ntBASIC10.54□□□□□ -0.72
CKS2P33552 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms