Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPA1P20036 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 AL590824.1-201ENST00000403828 1349 ntBASIC14.43□□□□□ -0.1
HLA-DPA1P20036 SHMT1P1-201ENST00000419974 1312 ntBASIC14.43□□□□□ -0.1
HLA-DPA1P20036 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 HMGA1P1-201ENST00000415560 1062 ntBASIC14.43□□□□□ -0.1
HLA-DPA1P20036 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 AL118558.3-201ENST00000607414 1079 ntBASIC14.43□□□□□ -0.1
HLA-DPA1P20036 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 AL157813.1-201ENST00000612996 587 ntBASIC14.43□□□□□ -0.1
HLA-DPA1P20036 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPA1P20036 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.43□□□□□ -0.1
HLA-DPA1P20036 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 TSPY25P-201ENST00000429463 745 ntBASIC14.42□□□□□ -0.1
HLA-DPA1P20036 NKAIN1P1-201ENST00000435754 582 ntBASIC14.42□□□□□ -0.1
HLA-DPA1P20036 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 AC125604.1-201ENST00000496255 707 ntBASIC14.42□□□□□ -0.1
HLA-DPA1P20036 RCC2P8-201ENST00000502779 1035 ntBASIC14.42□□□□□ -0.1
HLA-DPA1P20036 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms