Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PARP1P09874 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PARP1P09874 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.55■□□□□ 0.24
PARP1P09874 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.55■□□□□ 0.24
PARP1P09874 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PARP1P09874 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 AL627231.1-201ENST00000394467 1125 ntBASIC16.55■□□□□ 0.24
PARP1P09874 AL807761.2-201ENST00000422849 729 ntBASIC16.55■□□□□ 0.24
PARP1P09874 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.55■□□□□ 0.24
PARP1P09874 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.55■□□□□ 0.24
PARP1P09874 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.55■□□□□ 0.24
PARP1P09874 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.55■□□□□ 0.24
PARP1P09874 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.55■□□□□ 0.24
PARP1P09874 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.55■□□□□ 0.24
PARP1P09874 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.55■□□□□ 0.24
PARP1P09874 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PARP1P09874 SIGLEC18P-201ENST00000602271 909 ntBASIC16.55■□□□□ 0.24
PARP1P09874 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PARP1P09874 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PARP1P09874 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.55■□□□□ 0.24
PARP1P09874 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.55■□□□□ 0.24
PARP1P09874 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PARP1P09874 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PARP1P09874 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 RPL13AP3-202ENST00000494676 1473 ntBASIC16.54■□□□□ 0.24
PARP1P09874 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 AL590824.1-201ENST00000403828 1349 ntBASIC16.54■□□□□ 0.24
PARP1P09874 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.54■□□□□ 0.24
PARP1P09874 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PARP1P09874 AC067931.2-201ENST00000623655 2003 ntBASIC16.54■□□□□ 0.24
PARP1P09874 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PARP1P09874 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 AC006987.1-201ENST00000413610 527 ntBASIC16.54■□□□□ 0.24
PARP1P09874 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.54■□□□□ 0.24
PARP1P09874 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.54■□□□□ 0.24
PARP1P09874 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.54■□□□□ 0.24
PARP1P09874 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.54■□□□□ 0.24
PARP1P09874 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.54■□□□□ 0.24
PARP1P09874 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PARP1P09874 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PARP1P09874 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.54■□□□□ 0.24
PARP1P09874 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.54■□□□□ 0.24
PARP1P09874 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PARP1P09874 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PARP1P09874 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.53■□□□□ 0.24
PARP1P09874 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.53■□□□□ 0.24
PARP1P09874 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
PARP1P09874 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PARP1P09874 CICP4-201ENST00000447359 2812 ntBASIC16.53■□□□□ 0.24
PARP1P09874 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PARP1P09874 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.53■□□□□ 0.24
PARP1P09874 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms