Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM1P09493 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM1P09493 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TPM1P09493 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM1P09493 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
TPM1P09493 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TPM1P09493 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.83■□□□□ 0.13
TPM1P09493 AC009474.1-201ENST00000455096 1565 ntBASIC15.83■□□□□ 0.13
TPM1P09493 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.83■□□□□ 0.13
TPM1P09493 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TPM1P09493 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TPM1P09493 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TPM1P09493 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC15.83■□□□□ 0.13
TPM1P09493 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TPM1P09493 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TPM1P09493 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
TPM1P09493 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TPM1P09493 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TPM1P09493 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.83■□□□□ 0.12
TPM1P09493 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.83■□□□□ 0.12
TPM1P09493 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.83■□□□□ 0.12
TPM1P09493 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.83■□□□□ 0.12
TPM1P09493 RN7SL48P-201ENST00000579283 293 ntBASIC15.83■□□□□ 0.12
TPM1P09493 CLUHP6-201ENST00000580789 941 ntBASIC15.83■□□□□ 0.12
TPM1P09493 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
TPM1P09493 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.83■□□□□ 0.12
TPM1P09493 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.83■□□□□ 0.12
TPM1P09493 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 AP000593.2-201ENST00000542775 1433 ntBASIC15.83■□□□□ 0.12
TPM1P09493 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC15.83■□□□□ 0.12
TPM1P09493 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TPM1P09493 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
TPM1P09493 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
TPM1P09493 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 PCDHB18P-202ENST00000526308 3197 ntBASIC15.83■□□□□ 0.12
TPM1P09493 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TPM1P09493 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TPM1P09493 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
TPM1P09493 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TPM1P09493 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM1P09493 USO1-201ENST00000264904 4135 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM1P09493 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TPM1P09493 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.82■□□□□ 0.12
TPM1P09493 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
TPM1P09493 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.82■□□□□ 0.12
TPM1P09493 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.82■□□□□ 0.12
TPM1P09493 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.82■□□□□ 0.12
TPM1P09493 AK2P2-201ENST00000439142 405 ntBASIC15.82■□□□□ 0.12
TPM1P09493 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM1P09493 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
TPM1P09493 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.82■□□□□ 0.12
TPM1P09493 AC093433.1-201ENST00000458048 571 ntBASIC15.82■□□□□ 0.12
TPM1P09493 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.82■□□□□ 0.12
TPM1P09493 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM1P09493 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM1P09493 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.82■□□□□ 0.12
TPM1P09493 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TPM1P09493 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.82■□□□□ 0.12
TPM1P09493 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms