Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CICP8-201ENST00000455800 2813 ntBASIC14.79□□□□□ -0.04
CD48P09326 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.79□□□□□ -0.04
CD48P09326 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.79□□□□□ -0.04
CD48P09326 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.79□□□□□ -0.04
CD48P09326 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD48P09326 AC091271.1-201ENST00000611877 1162 ntBASIC14.79□□□□□ -0.04
CD48P09326 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.79□□□□□ -0.04
CD48P09326 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.79□□□□□ -0.04
CD48P09326 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD48P09326 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.79□□□□□ -0.04
CD48P09326 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD48P09326 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD48P09326 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD48P09326 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CD48P09326 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CD48P09326 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CD48P09326 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.78□□□□□ -0.04
CD48P09326 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CD48P09326 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
CD48P09326 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.78□□□□□ -0.04
CD48P09326 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.78□□□□□ -0.04
CD48P09326 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD48P09326 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.78□□□□□ -0.04
CD48P09326 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD48P09326 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.78□□□□□ -0.04
CD48P09326 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.78□□□□□ -0.04
CD48P09326 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.78□□□□□ -0.04
CD48P09326 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 AC103592.1-201ENST00000394513 664 ntBASIC14.78□□□□□ -0.04
CD48P09326 HMGA1P1-201ENST00000415560 1062 ntBASIC14.78□□□□□ -0.04
CD48P09326 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.78□□□□□ -0.04
CD48P09326 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 FAM8A2P-201ENST00000528813 1142 ntBASIC14.78□□□□□ -0.04
CD48P09326 AC009779.1-201ENST00000551138 283 ntBASIC14.78□□□□□ -0.04
CD48P09326 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.78□□□□□ -0.04
CD48P09326 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CD48P09326 RN7SL163P-201ENST00000583100 276 ntBASIC14.78□□□□□ -0.04
CD48P09326 AL157813.1-201ENST00000612996 587 ntBASIC14.78□□□□□ -0.04
CD48P09326 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.78□□□□□ -0.04
CD48P09326 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 TCAF1P1-201ENST00000414990 2232 ntBASIC14.78□□□□□ -0.04
CD48P09326 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 AC099521.3-201ENST00000624251 2938 ntBASIC14.78□□□□□ -0.04
CD48P09326 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD48P09326 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
CD48P09326 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD48P09326 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
CD48P09326 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD48P09326 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.77□□□□□ -0.04
CD48P09326 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CD48P09326 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.77□□□□□ -0.04
CD48P09326 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 LINC01815-202ENST00000641468 1409 ntBASIC14.77□□□□□ -0.04
CD48P09326 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CD48P09326 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 COL6A4P2-202ENST00000504443 2753 ntBASIC14.77□□□□□ -0.04
CD48P09326 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
CD48P09326 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.77□□□□□ -0.04
CD48P09326 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CD48P09326 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 SHMT1P1-201ENST00000419974 1312 ntBASIC14.77□□□□□ -0.04
CD48P09326 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD48P09326 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.77□□□□□ -0.04
CD48P09326 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms