Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TPM3P06753 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 AGGF1P10-201ENST00000635005 2191 ntBASIC16.1■□□□□ 0.17
TPM3P06753 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TPM3P06753 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC16.1■□□□□ 0.17
TPM3P06753 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TPM3P06753 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC16.09■□□□□ 0.17
TPM3P06753 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.09■□□□□ 0.17
TPM3P06753 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC16.09■□□□□ 0.17
TPM3P06753 LINC01165-201ENST00000445190 1623 ntBASIC16.09■□□□□ 0.17
TPM3P06753 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TPM3P06753 ACKR1-201ENST00000368121 1240 ntBASIC16.09■□□□□ 0.17
TPM3P06753 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.09■□□□□ 0.17
TPM3P06753 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.09■□□□□ 0.17
TPM3P06753 AC004890.2-204ENST00000481968 304 ntBASIC16.09■□□□□ 0.17
TPM3P06753 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.09■□□□□ 0.17
TPM3P06753 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.09■□□□□ 0.17
TPM3P06753 AC027237.1-201ENST00000560942 655 ntBASIC16.09■□□□□ 0.17
TPM3P06753 AC005586.2-201ENST00000563946 837 ntBASIC16.09■□□□□ 0.17
TPM3P06753 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.09■□□□□ 0.17
TPM3P06753 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
TPM3P06753 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.09■□□□□ 0.17
TPM3P06753 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.09■□□□□ 0.17
TPM3P06753 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC16.09■□□□□ 0.17
TPM3P06753 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TPM3P06753 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TPM3P06753 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC16.09■□□□□ 0.17
TPM3P06753 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
TPM3P06753 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC16.09■□□□□ 0.17
TPM3P06753 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC16.09■□□□□ 0.17
TPM3P06753 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TPM3P06753 SLC9A3P3-201ENST00000457608 2229 ntBASIC16.09■□□□□ 0.17
TPM3P06753 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TPM3P06753 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC16.08■□□□□ 0.17
TPM3P06753 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.08■□□□□ 0.17
TPM3P06753 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.08■□□□□ 0.17
TPM3P06753 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
TPM3P06753 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TPM3P06753 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TPM3P06753 GHET1-201ENST00000627071 1906 ntBASIC16.08■□□□□ 0.16
TPM3P06753 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC16.08■□□□□ 0.16
TPM3P06753 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.08■□□□□ 0.16
TPM3P06753 ARSEP1-201ENST00000420443 635 ntBASIC16.08■□□□□ 0.16
TPM3P06753 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.08■□□□□ 0.16
TPM3P06753 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 PUDPP3-201ENST00000445368 636 ntBASIC16.08■□□□□ 0.16
TPM3P06753 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.08■□□□□ 0.16
TPM3P06753 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.08■□□□□ 0.16
TPM3P06753 AC004466.1-201ENST00000599515 1080 ntBASIC16.08■□□□□ 0.16
TPM3P06753 AC093726.1-201ENST00000608064 963 ntBASIC16.08■□□□□ 0.16
TPM3P06753 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.08■□□□□ 0.16
TPM3P06753 AC093028.1-201ENST00000622998 982 ntBASIC16.08■□□□□ 0.16
TPM3P06753 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC16.08■□□□□ 0.16
TPM3P06753 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TPM3P06753 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC16.08■□□□□ 0.16
TPM3P06753 AL445250.1-201ENST00000641671 2259 ntBASIC16.08■□□□□ 0.16
TPM3P06753 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TPM3P06753 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC16.08■□□□□ 0.16
TPM3P06753 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TPM3P06753 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TPM3P06753 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
TPM3P06753 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.08■□□□□ 0.16
TPM3P06753 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TPM3P06753 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TPM3P06753 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms