Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.37□□□□□ -0.11
APOA4P06727 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.37□□□□□ -0.11
APOA4P06727 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.37□□□□□ -0.11
APOA4P06727 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.37□□□□□ -0.11
APOA4P06727 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
APOA4P06727 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.37□□□□□ -0.11
APOA4P06727 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APOA4P06727 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
APOA4P06727 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA4P06727 NCLP1-201ENST00000445357 1963 ntBASIC14.36□□□□□ -0.11
APOA4P06727 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA4P06727 AC244394.1-201ENST00000435000 1665 ntBASIC14.36□□□□□ -0.11
APOA4P06727 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA4P06727 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA4P06727 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA4P06727 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA4P06727 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
APOA4P06727 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.36□□□□□ -0.11
APOA4P06727 AC012441.2-201ENST00000444843 739 ntBASIC14.36□□□□□ -0.11
APOA4P06727 HSPB1P2-201ENST00000448722 546 ntBASIC14.36□□□□□ -0.11
APOA4P06727 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA4P06727 RPL13AP20-201ENST00000459725 609 ntBASIC14.36□□□□□ -0.11
APOA4P06727 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.36□□□□□ -0.11
APOA4P06727 RPSAP36-202ENST00000494591 1261 ntBASIC14.36□□□□□ -0.11
APOA4P06727 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA4P06727 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA4P06727 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA4P06727 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA4P06727 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA4P06727 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APOA4P06727 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA4P06727 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
APOA4P06727 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APOA4P06727 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA4P06727 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA4P06727 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA4P06727 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA4P06727 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
APOA4P06727 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA4P06727 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA4P06727 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA4P06727 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA4P06727 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA4P06727 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA4P06727 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.35□□□□□ -0.11
APOA4P06727 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.35□□□□□ -0.11
APOA4P06727 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 AL157407.1-201ENST00000435784 904 ntBASIC14.35□□□□□ -0.11
APOA4P06727 AK2P2-201ENST00000439142 405 ntBASIC14.35□□□□□ -0.11
APOA4P06727 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.35□□□□□ -0.11
APOA4P06727 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.35□□□□□ -0.11
APOA4P06727 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms