Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 AC008825.2-201ENST00000603374 718 ntBASIC14.38□□□□□ -0.11
RFPL1O75677 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RFPL1O75677 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.38□□□□□ -0.11
RFPL1O75677 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RFPL1O75677 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.38□□□□□ -0.11
RFPL1O75677 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RFPL1O75677 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RFPL1O75677 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.38□□□□□ -0.11
RFPL1O75677 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RFPL1O75677 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.37□□□□□ -0.11
RFPL1O75677 AL359845.1-201ENST00000458202 1648 ntBASIC14.37□□□□□ -0.11
RFPL1O75677 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RFPL1O75677 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RFPL1O75677 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RFPL1O75677 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RFPL1O75677 AC092506.1-202ENST00000401022 528 ntBASIC14.37□□□□□ -0.11
RFPL1O75677 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
RFPL1O75677 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.37□□□□□ -0.11
RFPL1O75677 CALR4P-201ENST00000431943 946 ntBASIC14.37□□□□□ -0.11
RFPL1O75677 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.37□□□□□ -0.11
RFPL1O75677 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.37□□□□□ -0.11
RFPL1O75677 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RFPL1O75677 AC078819.1-201ENST00000547454 765 ntBASIC14.37□□□□□ -0.11
RFPL1O75677 AC012085.1-201ENST00000548270 765 ntBASIC14.37□□□□□ -0.11
RFPL1O75677 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.37□□□□□ -0.11
RFPL1O75677 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 AL358472.3-201ENST00000608147 415 ntBASIC14.37□□□□□ -0.11
RFPL1O75677 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.37□□□□□ -0.11
RFPL1O75677 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RFPL1O75677 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.37□□□□□ -0.11
RFPL1O75677 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.37□□□□□ -0.11
RFPL1O75677 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFPL1O75677 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.37□□□□□ -0.11
RFPL1O75677 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFPL1O75677 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFPL1O75677 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFPL1O75677 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.36□□□□□ -0.11
RFPL1O75677 BEND3P3-201ENST00000611030 2440 ntBASIC14.36□□□□□ -0.11
RFPL1O75677 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.36□□□□□ -0.11
RFPL1O75677 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RFPL1O75677 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFPL1O75677 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFPL1O75677 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFPL1O75677 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RFPL1O75677 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.36□□□□□ -0.11
RFPL1O75677 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFPL1O75677 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFPL1O75677 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFPL1O75677 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFPL1O75677 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms