Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 CICP1-201ENST00000416803 2410 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SSSCA1O60232 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SSSCA1O60232 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SSSCA1O60232 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.71□□□□□ -0.53
SSSCA1O60232 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.71□□□□□ -0.53
SSSCA1O60232 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 AC102953.2-201ENST00000609755 3026 ntBASIC11.71□□□□□ -0.53
SSSCA1O60232 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SSSCA1O60232 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.71□□□□□ -0.53
SSSCA1O60232 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.71□□□□□ -0.53
SSSCA1O60232 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.71□□□□□ -0.53
SSSCA1O60232 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 CNN2P11-201ENST00000429351 262 ntBASIC11.71□□□□□ -0.53
SSSCA1O60232 AC092580.3-201ENST00000430932 139 ntBASIC11.71□□□□□ -0.53
SSSCA1O60232 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.71□□□□□ -0.53
SSSCA1O60232 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.71□□□□□ -0.53
SSSCA1O60232 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.71□□□□□ -0.53
SSSCA1O60232 AC140878.1-201ENST00000565277 250 ntBASIC11.71□□□□□ -0.53
SSSCA1O60232 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.71□□□□□ -0.53
SSSCA1O60232 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.71□□□□□ -0.53
SSSCA1O60232 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.71□□□□□ -0.53
SSSCA1O60232 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 BRI3BPP1-201ENST00000594224 787 ntBASIC11.71□□□□□ -0.53
SSSCA1O60232 AC004840.1-201ENST00000636359 365 ntBASIC11.71□□□□□ -0.53
SSSCA1O60232 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSSCA1O60232 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SSSCA1O60232 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.71□□□□□ -0.54
SSSCA1O60232 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSSCA1O60232 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SSSCA1O60232 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.71□□□□□ -0.54
SSSCA1O60232 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSSCA1O60232 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSSCA1O60232 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SSSCA1O60232 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSSCA1O60232 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SSSCA1O60232 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSSCA1O60232 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSSCA1O60232 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSSCA1O60232 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.71□□□□□ -0.54
SSSCA1O60232 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 AC090114.2-201ENST00000608477 7054 ntBASIC11.7□□□□□ -0.54
SSSCA1O60232 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 AC010336.1-201ENST00000539278 4739 ntBASIC11.7□□□□□ -0.54
SSSCA1O60232 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms