Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC244197.1-201ENST00000456494 951 ntBASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 RN7SL582P-201ENST00000491078 279 ntBASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 TRMT112P3-201ENST00000580149 358 ntBASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 MIR6074-201ENST00000612054 107 ntBASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.48□□□□□ -0.25
CCDC187A0A096LP49 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 CICP4-201ENST00000447359 2812 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 LINC00115-201ENST00000473798 1317 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 AC019109.1-201ENST00000401725 1874 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 AL009178.2-201ENST00000597278 2719 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 OR7E115P-201ENST00000382617 1024 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 AP000354.1-201ENST00000396982 456 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 MIR1301-201ENST00000408518 82 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 SLC25A15P3-201ENST00000505530 290 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 GOLGA2P7-209ENST00000560408 745 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 AL118516.1-201ENST00000564152 670 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 MIR4265-201ENST00000582152 99 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 AC010632.2-201ENST00000588369 1224 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 AC012073.1-201ENST00000606114 1108 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 KRT8P18-201ENST00000413425 1445 ntBASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCDC187A0A096LP49 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 AC215219.1-201ENST00000400706 1817 ntBASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
CCDC187A0A096LP49 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms