Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TUBB8P8-201ENST00000458717 1058 ntBASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AC108729.1-201ENST00000487812 947 ntBASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 RBM8B-201ENST00000555532 525 ntBASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AL008718.2-201ENST00000609206 1313 ntBASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AC064801.2-201ENST00000625052 1303 ntBASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 MIR663B-201ENST00000408361 115 ntBASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 AL161932.2-201ENST00000435436 679 ntBASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 KLF2P1-201ENST00000447438 1042 ntBASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 AC021723.1-201ENST00000486306 515 ntBASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 MTCYBP27-201ENST00000555160 670 ntBASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 AL023803.2-201ENST00000620080 638 ntBASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 Z98259.2-201ENST00000641583 609 ntBASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 LINC01965-201ENST00000412112 1378 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB13Q9Y5F0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHB13Q9Y5F0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms