Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 AC135782.3-201ENST00000562782 2105 ntBASIC12.82□□□□□ -0.36
COPS3Q9UNS2 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 PIN1P1-201ENST00000412108 996 ntBASIC12.82□□□□□ -0.36
COPS3Q9UNS2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 AC002472.2-201ENST00000442739 958 ntBASIC12.82□□□□□ -0.36
COPS3Q9UNS2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 TP53TG3HP-202ENST00000569755 579 ntBASIC12.82□□□□□ -0.36
COPS3Q9UNS2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.82□□□□□ -0.36
COPS3Q9UNS2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.81□□□□□ -0.36
COPS3Q9UNS2 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 FAM8A4P-201ENST00000435433 1213 ntBASIC12.81□□□□□ -0.36
COPS3Q9UNS2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms