Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 NCLP1-201ENST00000445357 1963 ntBASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 LAP3P2-201ENST00000454686 1454 ntBASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF3BQ9BZI7 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 STX3-207ENST00000633708 3111 ntTSL 5 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 AC099336.1-201ENST00000417053 1171 ntBASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 AL162426.1-201ENST00000624141 743 ntBASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 AC005252.3-201ENST00000623855 2258 ntBASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
UPF3BQ9BZI7 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 AL137784.3-201ENST00000623858 2288 ntBASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 AC099521.3-201ENST00000624251 2938 ntBASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPF3BQ9BZI7 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms