Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 TUBB8P4-201ENST00000511806 1324 ntBASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CRAMP1Q96RY5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CRAMP1Q96RY5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CRAMP1Q96RY5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CRAMP1Q96RY5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 NHP2P1-201ENST00000335274 462 ntBASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 AC005722.1-201ENST00000431878 964 ntBASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 RPSAP12-201ENST00000435879 888 ntBASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 RN7SL605P-201ENST00000577229 281 ntBASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.14■□□□□ 0.33
CRAMP1Q96RY5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 HSPA8P5-201ENST00000456928 2069 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 AC106827.1-201ENST00000366454 431 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 HLA-DMA-202ENST00000395303 1007 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 HNRNPA1P21-201ENST00000424115 961 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 AC092810.2-201ENST00000431570 362 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 RPS18P9-201ENST00000482817 460 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 AC092612.1-201ENST00000514501 998 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 GGNBP1-204ENST00000613113 887 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 AC144831.1-201ENST00000573312 2656 ntBASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.13■□□□□ 0.33
CRAMP1Q96RY5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 UROS-201ENST00000368774 744 ntTSL 2 BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 IFNWP2-201ENST00000431203 580 ntBASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC17.12■□□□□ 0.33
CRAMP1Q96RY5 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms