Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 CTBP2P3-201ENST00000585629 1255 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AC092364.2-202ENST00000597012 1073 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 CU634019.7-201ENST00000624153 1185 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 FP236241.2-201ENST00000624906 1185 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 NCLP1-201ENST00000445357 1963 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 AC024075.2-201ENST00000598112 1473 ntBASIC12.47□□□□□ -0.41
CCDC107Q8WV48 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 AC004466.1-201ENST00000599515 1080 ntBASIC12.47□□□□□ -0.41
CCDC107Q8WV48 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 DLX4-206ENST00000611342 1662 ntBASIC12.47□□□□□ -0.41
CCDC107Q8WV48 AL118506.1-201ENST00000601296 3082 ntBASIC12.47□□□□□ -0.41
CCDC107Q8WV48 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.47□□□□□ -0.41
CCDC107Q8WV48 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCDC107Q8WV48 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 MKRN5P-201ENST00000445263 1467 ntBASIC12.46□□□□□ -0.41
CCDC107Q8WV48 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms