Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 FAM58DP-201ENST00000428076 619 ntBASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 RBPMS2P1-201ENST00000437762 623 ntBASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 AL512361.1-201ENST00000554200 418 ntBASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 AC027237.1-201ENST00000560942 655 ntBASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 MIR4453-201ENST00000584019 89 ntBASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 BX539320.1-201ENST00000623759 877 ntBASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 NPTN-IT1-201ENST00000628401 2283 ntBASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LINC00308Q8TCZ7 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 AL590440.2-201ENST00000641973 1595 ntBASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 FAM90A11P-201ENST00000518378 2218 ntBASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 FTO-214ENST00000636218 2227 ntTSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 MRPL3P1-201ENST00000400109 1033 ntBASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 RPL37AP1-201ENST00000412502 279 ntBASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 SPDYE14P-201ENST00000442619 822 ntBASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
LINC00308Q8TCZ7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms