Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 ELK2AP-201ENST00000392510 1007 ntBASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 AC078875.1-201ENST00000431907 724 ntBASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 RBM8B-201ENST00000555532 525 ntBASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 MIR3907-201ENST00000579424 151 ntBASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 AC020922.3-201ENST00000595064 547 ntBASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 AL136172.1-201ENST00000598590 1394 ntBASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLDND2Q8NHS1 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AC130686.1-201ENST00000622936 2466 ntBASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AC018442.1-201ENST00000421439 2061 ntBASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AC144522.1-201ENST00000625111 1658 ntBASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 MRPL37P1-201ENST00000592451 1337 ntBASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AL353637.1-201ENST00000451571 732 ntBASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AC006122.1-201ENST00000493323 440 ntBASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AF254983.2-201ENST00000612331 135 ntBASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AL353770.1-201ENST00000614915 403 ntBASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AC079336.7-201ENST00000623428 1078 ntBASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms