Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 POP5-201ENST00000341039 913 ntTSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AC022080.1-201ENST00000366255 781 ntBASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AL136084.1-201ENST00000449172 318 ntBASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 UGT1A12P-201ENST00000447084 853 ntBASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AC092903.1-201ENST00000466506 262 ntBASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AP005264.5-201ENST00000590066 467 ntBASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AC048382.6-201ENST00000621980 1223 ntBASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AC126755.5-201ENST00000622756 267 ntBASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 MYO15B-237ENST00000642007 4893 ntBASIC11.81□□□□□ -0.52
CCDC168Q8NDH2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms