Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC50Q8IVM0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CCDC50Q8IVM0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC50Q8IVM0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CCDC50Q8IVM0 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC50Q8IVM0 AGAP10P-201ENST00000454844 2418 ntBASIC15.21■□□□□ 0.02
CCDC50Q8IVM0 AC114271.1-201ENST00000612689 2813 ntBASIC15.21■□□□□ 0.02
CCDC50Q8IVM0 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AC092933.1-201ENST00000393644 945 ntBASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AC016694.1-201ENST00000434179 700 ntBASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 USP32P1-208ENST00000506594 1164 ntBASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AC008735.3-201ENST00000596646 500 ntBASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AC233724.13-201ENST00000598383 410 ntBASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AC244669.2-201ENST00000612320 853 ntBASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AC025048.6-201ENST00000634326 1161 ntBASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC50Q8IVM0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AC004899.2-201ENST00000622993 3860 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AL022313.4-201ENST00000562756 2046 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 TMEM14DP-201ENST00000422205 345 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AL161932.2-201ENST00000435436 679 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AL035414.1-201ENST00000451327 857 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 CICP12-201ENST00000455801 843 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 INE1-201ENST00000456273 945 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 RN7SL692P-201ENST00000464677 288 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms