Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
AP1S2P56377 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S2P56377 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S2P56377 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S2P56377 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S2P56377 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
AP1S2P56377 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S2P56377 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S2P56377 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S2P56377 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S2P56377 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S2P56377 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S2P56377 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP1S2P56377 PFN1P12-201ENST00000455938 534 ntBASIC13.94□□□□□ -0.18
AP1S2P56377 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S2P56377 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S2P56377 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
AP1S2P56377 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S2P56377 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S2P56377 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.94□□□□□ -0.18
AP1S2P56377 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S2P56377 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S2P56377 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S2P56377 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S2P56377 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S2P56377 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S2P56377 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S2P56377 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S2P56377 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP1S2P56377 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S2P56377 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AP1S2P56377 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AP1S2P56377 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S2P56377 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S2P56377 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
AP1S2P56377 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
AP1S2P56377 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP1S2P56377 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
AP1S2P56377 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 BRWD1P1-201ENST00000401091 371 ntBASIC13.93□□□□□ -0.18
AP1S2P56377 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S2P56377 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.93□□□□□ -0.18
AP1S2P56377 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S2P56377 AC104073.2-201ENST00000453737 312 ntBASIC13.93□□□□□ -0.18
AP1S2P56377 MARK2P5-201ENST00000507649 634 ntBASIC13.93□□□□□ -0.18
AP1S2P56377 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.93□□□□□ -0.18
AP1S2P56377 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 AL008638.5-201ENST00000623814 1298 ntBASIC13.93□□□□□ -0.18
AP1S2P56377 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.93□□□□□ -0.18
AP1S2P56377 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S2P56377 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S2P56377 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
AP1S2P56377 AC018735.1-201ENST00000437208 1502 ntBASIC13.93□□□□□ -0.18
AP1S2P56377 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AP1S2P56377 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP1S2P56377 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S2P56377 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S2P56377 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S2P56377 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.93□□□□□ -0.18
AP1S2P56377 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S2P56377 AC111170.3-201ENST00000624282 2464 ntBASIC13.92□□□□□ -0.18
AP1S2P56377 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S2P56377 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S2P56377 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S2P56377 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.92□□□□□ -0.18
AP1S2P56377 AGAP10P-201ENST00000454844 2418 ntBASIC13.92□□□□□ -0.18
AP1S2P56377 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S2P56377 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S2P56377 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S2P56377 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.92□□□□□ -0.18
AP1S2P56377 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S2P56377 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S2P56377 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms