Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
CDH4P55283 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CDH4P55283 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CDH4P55283 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH4P55283 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH4P55283 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH4P55283 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH4P55283 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH4P55283 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDH4P55283 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH4P55283 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDH4P55283 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH4P55283 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH4P55283 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH4P55283 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH4P55283 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH4P55283 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH4P55283 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH4P55283 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.56□□□□□ -0.08
CDH4P55283 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH4P55283 AL133467.4-201ENST00000602953 725 ntBASIC14.56□□□□□ -0.08
CDH4P55283 AL021707.6-201ENST00000609212 491 ntBASIC14.56□□□□□ -0.08
CDH4P55283 AC015967.2-201ENST00000624092 234 ntBASIC14.56□□□□□ -0.08
CDH4P55283 AC006435.4-201ENST00000625037 234 ntBASIC14.56□□□□□ -0.08
CDH4P55283 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH4P55283 AL356737.1-201ENST00000634391 234 ntBASIC14.56□□□□□ -0.08
CDH4P55283 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH4P55283 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH4P55283 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CDH4P55283 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH4P55283 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH4P55283 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH4P55283 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH4P55283 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH4P55283 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CDH4P55283 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH4P55283 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 MAGEA5-201ENST00000446757 942 ntBASIC14.55□□□□□ -0.08
CDH4P55283 FTH1P22-201ENST00000456305 520 ntBASIC14.55□□□□□ -0.08
CDH4P55283 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH4P55283 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH4P55283 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH4P55283 AL606495.2-201ENST00000605867 535 ntBASIC14.55□□□□□ -0.08
CDH4P55283 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
CDH4P55283 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH4P55283 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH4P55283 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH4P55283 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDH4P55283 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH4P55283 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH4P55283 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH4P55283 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH4P55283 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH4P55283 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH4P55283 AL136379.1-201ENST00000623471 2642 ntBASIC14.54□□□□□ -0.08
CDH4P55283 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms