Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.61□□□□□ -0.23
CASP9P55211 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.61□□□□□ -0.23
CASP9P55211 AP006547.1-201ENST00000563435 692 ntBASIC13.61□□□□□ -0.23
CASP9P55211 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.61□□□□□ -0.23
CASP9P55211 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.61□□□□□ -0.23
CASP9P55211 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.61□□□□□ -0.23
CASP9P55211 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP9P55211 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP9P55211 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
CASP9P55211 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CASP9P55211 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CASP9P55211 AC009093.10-201ENST00000641956 1442 ntBASIC13.61□□□□□ -0.23
CASP9P55211 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CASP9P55211 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CASP9P55211 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CASP9P55211 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CASP9P55211 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.61□□□□□ -0.23
CASP9P55211 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP9P55211 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP9P55211 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CASP9P55211 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CASP9P55211 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP9P55211 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.61□□□□□ -0.23
CASP9P55211 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.61□□□□□ -0.23
CASP9P55211 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP9P55211 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP9P55211 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.61□□□□□ -0.23
CASP9P55211 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CASP9P55211 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP9P55211 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP9P55211 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP9P55211 MIR326-201ENST00000362220 95 ntBASIC13.6□□□□□ -0.23
CASP9P55211 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP9P55211 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CASP9P55211 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP9P55211 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.6□□□□□ -0.23
CASP9P55211 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.6□□□□□ -0.23
CASP9P55211 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP9P55211 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.6□□□□□ -0.23
CASP9P55211 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.6□□□□□ -0.23
CASP9P55211 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP9P55211 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP9P55211 AC099521.3-201ENST00000624251 2938 ntBASIC13.6□□□□□ -0.23
CASP9P55211 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP9P55211 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP9P55211 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP9P55211 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 TMBIM7P-202ENST00000641474 1516 ntBASIC13.59□□□□□ -0.23
CASP9P55211 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.59□□□□□ -0.23
CASP9P55211 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP9P55211 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CASP9P55211 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CASP9P55211 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP9P55211 SHC1P1-201ENST00000425230 1745 ntBASIC13.59□□□□□ -0.23
CASP9P55211 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP9P55211 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP9P55211 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP9P55211 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.59□□□□□ -0.23
CASP9P55211 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CASP9P55211 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP9P55211 AC006001.1-201ENST00000325130 474 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms