Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC063926.2-201ENST00000623766 1308 ntBASIC15.71■□□□□ 0.11
PMS1P54277 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 COL6A4P2-202ENST00000504443 2753 ntBASIC15.71■□□□□ 0.11
PMS1P54277 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.71■□□□□ 0.11
PMS1P54277 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.71■□□□□ 0.11
PMS1P54277 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PMS1P54277 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.71■□□□□ 0.11
PMS1P54277 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 MIR658-201ENST00000385210 100 ntBASIC15.71■□□□□ 0.11
PMS1P54277 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.71■□□□□ 0.11
PMS1P54277 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.71■□□□□ 0.11
PMS1P54277 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.71■□□□□ 0.11
PMS1P54277 GPR53P-205ENST00000457298 1084 ntBASIC15.71■□□□□ 0.11
PMS1P54277 RPL13AP20-201ENST00000459725 609 ntBASIC15.71■□□□□ 0.11
PMS1P54277 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 FAM86HP-204ENST00000513466 959 ntBASIC15.71■□□□□ 0.11
PMS1P54277 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.71■□□□□ 0.11
PMS1P54277 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 AC010328.2-201ENST00000597698 1111 ntBASIC15.71■□□□□ 0.11
PMS1P54277 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PMS1P54277 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
PMS1P54277 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PMS1P54277 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PMS1P54277 AC004899.1-201ENST00000424687 1714 ntBASIC15.71■□□□□ 0.1
PMS1P54277 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PMS1P54277 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PMS1P54277 RCC2P1-201ENST00000452257 1476 ntBASIC15.71■□□□□ 0.1
PMS1P54277 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PMS1P54277 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PMS1P54277 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PMS1P54277 SHMT1P1-201ENST00000419974 1312 ntBASIC15.7■□□□□ 0.1
PMS1P54277 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.7■□□□□ 0.1
PMS1P54277 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 AC018735.1-201ENST00000437208 1502 ntBASIC15.7■□□□□ 0.1
PMS1P54277 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.7■□□□□ 0.1
PMS1P54277 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PMS1P54277 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 AC103592.1-201ENST00000394513 664 ntBASIC15.7■□□□□ 0.1
PMS1P54277 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.7■□□□□ 0.1
PMS1P54277 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 MIR663B-201ENST00000408361 115 ntBASIC15.7■□□□□ 0.1
PMS1P54277 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.7■□□□□ 0.1
PMS1P54277 HMGA1P1-201ENST00000415560 1062 ntBASIC15.7■□□□□ 0.1
PMS1P54277 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.7■□□□□ 0.1
PMS1P54277 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.7■□□□□ 0.1
PMS1P54277 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.7■□□□□ 0.1
PMS1P54277 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.7■□□□□ 0.1
PMS1P54277 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 BNIP3P13-201ENST00000599968 566 ntBASIC15.7■□□□□ 0.1
PMS1P54277 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.7■□□□□ 0.1
PMS1P54277 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PMS1P54277 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms