Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
HTTP42858 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 HLA-W-207ENST00000439514 771 ntBASIC15.39■□□□□ 0.05
HTTP42858 RPSAP16-201ENST00000447583 821 ntBASIC15.39■□□□□ 0.05
HTTP42858 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 RN7SL2-201ENST00000490232 300 ntBASIC15.39■□□□□ 0.05
HTTP42858 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC15.39■□□□□ 0.05
HTTP42858 RN7SL4P-201ENST00000584058 295 ntBASIC15.39■□□□□ 0.05
HTTP42858 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.39■□□□□ 0.05
HTTP42858 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC15.39■□□□□ 0.05
HTTP42858 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HTTP42858 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HTTP42858 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 KRT18P45-201ENST00000515347 1333 ntBASIC15.39■□□□□ 0.05
HTTP42858 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 RN7SL22P-201ENST00000471800 269 ntBASIC15.39■□□□□ 0.05
HTTP42858 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HTTP42858 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.39■□□□□ 0.05
HTTP42858 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
HTTP42858 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HTTP42858 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.39■□□□□ 0.05
HTTP42858 KRT8P42-201ENST00000405771 1399 ntBASIC15.39■□□□□ 0.05
HTTP42858 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC15.39■□□□□ 0.05
HTTP42858 AC131235.2-201ENST00000445553 1057 ntBASIC15.39■□□□□ 0.05
HTTP42858 AC069421.1-201ENST00000447462 323 ntBASIC15.39■□□□□ 0.05
HTTP42858 AC009517.1-201ENST00000454750 570 ntBASIC15.39■□□□□ 0.05
HTTP42858 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC15.39■□□□□ 0.05
HTTP42858 IGHV7-56-201ENST00000518372 351 ntBASIC15.39■□□□□ 0.05
HTTP42858 FAM213AP2-201ENST00000521579 683 ntBASIC15.39■□□□□ 0.05
HTTP42858 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC15.39■□□□□ 0.05
HTTP42858 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC15.39■□□□□ 0.05
HTTP42858 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC15.39■□□□□ 0.05
HTTP42858 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HTTP42858 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTTP42858 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HTTP42858 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
HTTP42858 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTTP42858 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTTP42858 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.38■□□□□ 0.05
HTTP42858 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HTTP42858 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HTTP42858 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC15.38■□□□□ 0.05
HTTP42858 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.38■□□□□ 0.05
HTTP42858 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC15.38■□□□□ 0.05
HTTP42858 AC099552.4-201ENST00000624248 949 ntBASIC15.38■□□□□ 0.05
HTTP42858 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTTP42858 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
HTTP42858 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTTP42858 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTTP42858 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTTP42858 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC15.38■□□□□ 0.05
HTTP42858 RN7SL477P-201ENST00000488440 286 ntBASIC15.38■□□□□ 0.05
HTTP42858 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC15.38■□□□□ 0.05
HTTP42858 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC15.38■□□□□ 0.05
HTTP42858 PDLIM1P1-201ENST00000604187 969 ntBASIC15.38■□□□□ 0.05
HTTP42858 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HTTP42858 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HTTP42858 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
HTTP42858 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTTP42858 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HTTP42858 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTTP42858 AC106872.9-201ENST00000512437 1393 ntBASIC15.38■□□□□ 0.05
HTTP42858 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HTTP42858 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HTTP42858 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.37■□□□□ 0.05
HTTP42858 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 HMGN1P4-201ENST00000419500 290 ntBASIC15.37■□□□□ 0.05
HTTP42858 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC15.37■□□□□ 0.05
HTTP42858 RPL3P9-201ENST00000463217 1183 ntBASIC15.37■□□□□ 0.05
HTTP42858 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 AL158032.2-201ENST00000616818 195 ntBASIC15.37■□□□□ 0.05
HTTP42858 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC15.37■□□□□ 0.05
HTTP42858 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
HTTP42858 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HTTP42858 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
HTTP42858 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.37■□□□□ 0.05
HTTP42858 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 AL139158.3-201ENST00000641212 1562 ntBASIC15.37■□□□□ 0.05
HTTP42858 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.37■□□□□ 0.05
HTTP42858 RNA5SP84-201ENST00000364740 107 ntBASIC15.37■□□□□ 0.05
HTTP42858 NAA10-205ENST00000393712 908 ntTSL 5 BASIC15.37■□□□□ 0.05
HTTP42858 AC041040.1-201ENST00000425197 460 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms