Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HMGCLP35914 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HMGCLP35914 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 RCC2P1-201ENST00000452257 1476 ntBASIC14.19□□□□□ -0.14
HMGCLP35914 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HMGCLP35914 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HMGCLP35914 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGCLP35914 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGCLP35914 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
HMGCLP35914 BANF1P3-201ENST00000412556 261 ntBASIC14.19□□□□□ -0.14
HMGCLP35914 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGCLP35914 OR8T1P-201ENST00000421347 918 ntBASIC14.19□□□□□ -0.14
HMGCLP35914 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGCLP35914 Z97180.1-201ENST00000445173 988 ntBASIC14.19□□□□□ -0.14
HMGCLP35914 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGCLP35914 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
HMGCLP35914 MIR3619-201ENST00000579667 83 ntBASIC14.19□□□□□ -0.14
HMGCLP35914 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.19□□□□□ -0.14
HMGCLP35914 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.19□□□□□ -0.14
HMGCLP35914 AP001505.2-201ENST00000616815 443 ntBASIC14.19□□□□□ -0.14
HMGCLP35914 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HMGCLP35914 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HMGCLP35914 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HMGCLP35914 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGCLP35914 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCLP35914 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
HMGCLP35914 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 AC023794.5-201ENST00000564380 2157 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.18□□□□□ -0.14
HMGCLP35914 AC006987.1-201ENST00000413610 527 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 AC073150.1-201ENST00000450406 1084 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 RN7SL258P-201ENST00000478664 300 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCLP35914 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCLP35914 PHBP15-201ENST00000574228 665 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 KRT18P8-201ENST00000581937 1246 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.18□□□□□ -0.14
HMGCLP35914 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HMGCLP35914 LINC01783-202ENST00000614408 828 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGCLP35914 BX284668.2-205ENST00000619677 828 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.18□□□□□ -0.14
HMGCLP35914 AL139099.5-201ENST00000635274 300 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCLP35914 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HMGCLP35914 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 AC111170.3-201ENST00000624282 2464 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HMGCLP35914 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCLP35914 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGCLP35914 AC061965.1-201ENST00000560524 1465 ntBASIC14.18□□□□□ -0.14
HMGCLP35914 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGCLP35914 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGCLP35914 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HMGCLP35914 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.17□□□□□ -0.14
HMGCLP35914 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCLP35914 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms