Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 AC103592.1-201ENST00000394513 664 ntBASIC16.28■□□□□ 0.2
COPB2P35606 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.28■□□□□ 0.2
COPB2P35606 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.28■□□□□ 0.2
COPB2P35606 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.28■□□□□ 0.2
COPB2P35606 GRPEL2P1-201ENST00000453145 339 ntBASIC16.28■□□□□ 0.2
COPB2P35606 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.28■□□□□ 0.2
COPB2P35606 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.28■□□□□ 0.2
COPB2P35606 AC005740.1-201ENST00000515639 522 ntBASIC16.28■□□□□ 0.2
COPB2P35606 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.28■□□□□ 0.2
COPB2P35606 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.28■□□□□ 0.2
COPB2P35606 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.28■□□□□ 0.2
COPB2P35606 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.28■□□□□ 0.2
COPB2P35606 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
COPB2P35606 AC002044.2-201ENST00000624910 970 ntBASIC16.28■□□□□ 0.2
COPB2P35606 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.28■□□□□ 0.2
COPB2P35606 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.28■□□□□ 0.2
COPB2P35606 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.28■□□□□ 0.2
COPB2P35606 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.28■□□□□ 0.2
COPB2P35606 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COPB2P35606 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
COPB2P35606 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
COPB2P35606 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPB2P35606 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
COPB2P35606 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.28■□□□□ 0.2
COPB2P35606 INTS4P1-203ENST00000641008 3683 ntBASIC16.27■□□□□ 0.2
COPB2P35606 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.27■□□□□ 0.2
COPB2P35606 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.27■□□□□ 0.2
COPB2P35606 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPB2P35606 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.27■□□□□ 0.2
COPB2P35606 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.27■□□□□ 0.2
COPB2P35606 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPB2P35606 SHMT1P1-201ENST00000419974 1312 ntBASIC16.27■□□□□ 0.2
COPB2P35606 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPB2P35606 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPB2P35606 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPB2P35606 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPB2P35606 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.27■□□□□ 0.2
COPB2P35606 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPB2P35606 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.27■□□□□ 0.2
COPB2P35606 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.27■□□□□ 0.2
COPB2P35606 GCSHP3-201ENST00000431120 391 ntBASIC16.27■□□□□ 0.2
COPB2P35606 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.27■□□□□ 0.2
COPB2P35606 RN7SL788P-201ENST00000460504 316 ntBASIC16.27■□□□□ 0.2
COPB2P35606 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.27■□□□□ 0.2
COPB2P35606 AC226150.1-201ENST00000544259 466 ntBASIC16.27■□□□□ 0.2
COPB2P35606 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.27■□□□□ 0.2
COPB2P35606 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.27■□□□□ 0.2
COPB2P35606 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.27■□□□□ 0.2
COPB2P35606 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.27■□□□□ 0.2
COPB2P35606 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.27■□□□□ 0.2
COPB2P35606 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.27■□□□□ 0.2
COPB2P35606 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.27■□□□□ 0.2
COPB2P35606 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.27■□□□□ 0.2
COPB2P35606 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPB2P35606 AL359091.4-201ENST00000610052 409 ntBASIC16.27■□□□□ 0.2
COPB2P35606 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.27■□□□□ 0.2
COPB2P35606 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPB2P35606 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.27■□□□□ 0.2
COPB2P35606 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.27■□□□□ 0.2
COPB2P35606 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.27■□□□□ 0.2
COPB2P35606 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPB2P35606 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPB2P35606 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COPB2P35606 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.27■□□□□ 0.19
COPB2P35606 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.27■□□□□ 0.19
COPB2P35606 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPB2P35606 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPB2P35606 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPB2P35606 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
COPB2P35606 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPB2P35606 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
COPB2P35606 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPB2P35606 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
COPB2P35606 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.26■□□□□ 0.19
COPB2P35606 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPB2P35606 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPB2P35606 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COPB2P35606 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPB2P35606 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPB2P35606 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
COPB2P35606 AC067931.2-201ENST00000623655 2003 ntBASIC16.26■□□□□ 0.19
COPB2P35606 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPB2P35606 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.26■□□□□ 0.19
COPB2P35606 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COPB2P35606 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms