Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC138696.2-201ENST00000607376 223 ntBASIC16.12■□□□□ 0.17
TPM3P06753 BX088702.1-201ENST00000610784 235 ntBASIC16.12■□□□□ 0.17
TPM3P06753 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TPM3P06753 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM3P06753 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM3P06753 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.12■□□□□ 0.17
TPM3P06753 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 AL590440.2-201ENST00000641973 1595 ntBASIC16.12■□□□□ 0.17
TPM3P06753 AL031719.1-201ENST00000623365 2587 ntBASIC16.12■□□□□ 0.17
TPM3P06753 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM3P06753 GOLGA2P5-201ENST00000266746 2395 ntBASIC16.12■□□□□ 0.17
TPM3P06753 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM3P06753 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TPM3P06753 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TPM3P06753 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC16.11■□□□□ 0.17
TPM3P06753 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TPM3P06753 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TPM3P06753 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 AC026271.4-201ENST00000578214 1833 ntBASIC16.11■□□□□ 0.17
TPM3P06753 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC16.11■□□□□ 0.17
TPM3P06753 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 SPDYE19P-201ENST00000338590 713 ntBASIC16.11■□□□□ 0.17
TPM3P06753 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TPM3P06753 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.11■□□□□ 0.17
TPM3P06753 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.11■□□□□ 0.17
TPM3P06753 ALG3P1-201ENST00000508806 1114 ntBASIC16.11■□□□□ 0.17
TPM3P06753 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.11■□□□□ 0.17
TPM3P06753 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.11■□□□□ 0.17
TPM3P06753 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TPM3P06753 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC16.11■□□□□ 0.17
TPM3P06753 AC099568.2-201ENST00000609194 695 ntBASIC16.11■□□□□ 0.17
TPM3P06753 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.11■□□□□ 0.17
TPM3P06753 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.11■□□□□ 0.17
TPM3P06753 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.11■□□□□ 0.17
TPM3P06753 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.11■□□□□ 0.17
TPM3P06753 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM3P06753 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM3P06753 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TPM3P06753 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.1■□□□□ 0.17
TPM3P06753 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.1■□□□□ 0.17
TPM3P06753 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.1■□□□□ 0.17
TPM3P06753 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TPM3P06753 GNAQP1-201ENST00000444815 1067 ntBASIC16.1■□□□□ 0.17
TPM3P06753 AL512638.1-201ENST00000457493 794 ntBASIC16.1■□□□□ 0.17
TPM3P06753 AC093004.1-201ENST00000508850 424 ntBASIC16.1■□□□□ 0.17
TPM3P06753 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.1■□□□□ 0.17
TPM3P06753 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.1■□□□□ 0.17
TPM3P06753 AC055876.2-201ENST00000531834 546 ntBASIC16.1■□□□□ 0.17
TPM3P06753 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.1■□□□□ 0.17
TPM3P06753 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.1■□□□□ 0.17
TPM3P06753 AC008761.3-201ENST00000624803 892 ntBASIC16.1■□□□□ 0.17
TPM3P06753 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TPM3P06753 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
TPM3P06753 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC16.1■□□□□ 0.17
TPM3P06753 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms