Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.07■□□□□ 0.32
CHGBP05060 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.07■□□□□ 0.32
CHGBP05060 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.07■□□□□ 0.32
CHGBP05060 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.07■□□□□ 0.32
CHGBP05060 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHGBP05060 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CHGBP05060 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.07■□□□□ 0.32
CHGBP05060 AL627231.1-201ENST00000394467 1125 ntBASIC17.07■□□□□ 0.32
CHGBP05060 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.07■□□□□ 0.32
CHGBP05060 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.07■□□□□ 0.32
CHGBP05060 KRT18P15-201ENST00000458108 1291 ntBASIC17.07■□□□□ 0.32
CHGBP05060 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.07■□□□□ 0.32
CHGBP05060 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.07■□□□□ 0.32
CHGBP05060 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.07■□□□□ 0.32
CHGBP05060 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC17.07■□□□□ 0.32
CHGBP05060 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHGBP05060 FAM90A12P-201ENST00000519497 2375 ntBASIC17.07■□□□□ 0.32
CHGBP05060 FAM90A24P-201ENST00000520792 2369 ntBASIC17.07■□□□□ 0.32
CHGBP05060 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.07■□□□□ 0.32
CHGBP05060 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHGBP05060 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 AC072061.1-201ENST00000569710 2234 ntBASIC17.06■□□□□ 0.32
CHGBP05060 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CHGBP05060 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.06■□□□□ 0.32
CHGBP05060 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.06■□□□□ 0.32
CHGBP05060 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.06■□□□□ 0.32
CHGBP05060 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.06■□□□□ 0.32
CHGBP05060 KRT18P9-201ENST00000604826 1300 ntBASIC17.06■□□□□ 0.32
CHGBP05060 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.06■□□□□ 0.32
CHGBP05060 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.06■□□□□ 0.32
CHGBP05060 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.06■□□□□ 0.32
CHGBP05060 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.06■□□□□ 0.32
CHGBP05060 FGFR3P1-201ENST00000449999 601 ntBASIC17.06■□□□□ 0.32
CHGBP05060 DUTP3-201ENST00000450025 415 ntBASIC17.06■□□□□ 0.32
CHGBP05060 MRPL22P1-201ENST00000505398 616 ntBASIC17.06■□□□□ 0.32
CHGBP05060 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.06■□□□□ 0.32
CHGBP05060 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.06■□□□□ 0.32
CHGBP05060 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.06■□□□□ 0.32
CHGBP05060 KLF17P1-201ENST00000547105 1126 ntBASIC17.06■□□□□ 0.32
CHGBP05060 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.06■□□□□ 0.32
CHGBP05060 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHGBP05060 AC106872.11-201ENST00000605838 421 ntBASIC17.06■□□□□ 0.32
CHGBP05060 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.06■□□□□ 0.32
CHGBP05060 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.06■□□□□ 0.32
CHGBP05060 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.06■□□□□ 0.32
CHGBP05060 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.06■□□□□ 0.32
CHGBP05060 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CHGBP05060 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CHGBP05060 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHGBP05060 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC17.05■□□□□ 0.32
CHGBP05060 KRT8P43-201ENST00000406052 1458 ntBASIC17.05■□□□□ 0.32
CHGBP05060 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.05■□□□□ 0.32
CHGBP05060 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CHGBP05060 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.05■□□□□ 0.32
CHGBP05060 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.05■□□□□ 0.32
CHGBP05060 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.05■□□□□ 0.32
CHGBP05060 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.05■□□□□ 0.32
CHGBP05060 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHGBP05060 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.05■□□□□ 0.32
CHGBP05060 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.05■□□□□ 0.32
CHGBP05060 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.05■□□□□ 0.32
CHGBP05060 FTH1P22-201ENST00000456305 520 ntBASIC17.05■□□□□ 0.32
CHGBP05060 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.05■□□□□ 0.32
CHGBP05060 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CHGBP05060 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.05■□□□□ 0.32
CHGBP05060 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.05■□□□□ 0.32
CHGBP05060 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CHGBP05060 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.05■□□□□ 0.32
CHGBP05060 AC084781.1-201ENST00000613737 656 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms