Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AL157407.1-201ENST00000435784 904 ntBASIC13.94□□□□□ -0.18
KRT6AP02538 E2F3P2-201ENST00000447755 1422 ntBASIC13.94□□□□□ -0.18
KRT6AP02538 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
KRT6AP02538 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.94□□□□□ -0.18
KRT6AP02538 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
KRT6AP02538 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.94□□□□□ -0.18
KRT6AP02538 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.94□□□□□ -0.18
KRT6AP02538 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.94□□□□□ -0.18
KRT6AP02538 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 AP006547.1-201ENST00000563435 692 ntBASIC13.94□□□□□ -0.18
KRT6AP02538 MIR3197-201ENST00000582241 73 ntBASIC13.94□□□□□ -0.18
KRT6AP02538 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
KRT6AP02538 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
KRT6AP02538 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
KRT6AP02538 REXO1L6P-201ENST00000603433 1515 ntBASIC13.94□□□□□ -0.18
KRT6AP02538 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 LAP3P2-201ENST00000454686 1454 ntBASIC13.93□□□□□ -0.18
KRT6AP02538 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.93□□□□□ -0.18
KRT6AP02538 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 AL008718.2-201ENST00000609206 1313 ntBASIC13.93□□□□□ -0.18
KRT6AP02538 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 AC015909.5-201ENST00000624336 2266 ntBASIC13.93□□□□□ -0.18
KRT6AP02538 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.93□□□□□ -0.18
KRT6AP02538 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
KRT6AP02538 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.93□□□□□ -0.18
KRT6AP02538 AL645933.1-201ENST00000440087 609 ntBASIC13.93□□□□□ -0.18
KRT6AP02538 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.93□□□□□ -0.18
KRT6AP02538 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.93□□□□□ -0.18
KRT6AP02538 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.93□□□□□ -0.18
KRT6AP02538 KRT18P8-201ENST00000581937 1246 ntBASIC13.93□□□□□ -0.18
KRT6AP02538 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.93□□□□□ -0.18
KRT6AP02538 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.93□□□□□ -0.18
KRT6AP02538 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
KRT6AP02538 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.93□□□□□ -0.18
KRT6AP02538 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 PDIA3P1-201ENST00000471856 1510 ntBASIC13.93□□□□□ -0.18
KRT6AP02538 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
KRT6AP02538 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.93□□□□□ -0.18
KRT6AP02538 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.93□□□□□ -0.18
KRT6AP02538 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
KRT6AP02538 AC073548.1-201ENST00000624088 1882 ntBASIC13.93□□□□□ -0.18
KRT6AP02538 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
KRT6AP02538 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRT6AP02538 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.93□□□□□ -0.18
KRT6AP02538 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KRT6AP02538 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
KRT6AP02538 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.92□□□□□ -0.18
KRT6AP02538 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
KRT6AP02538 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms