Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AC015909.3-201ENST00000572855 1794 ntBASIC15.35■□□□□ 0.05
HLA-DRAP01903 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 CYP46A4P-201ENST00000414953 267 ntBASIC15.35■□□□□ 0.05
HLA-DRAP01903 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 ISCA2P1-201ENST00000425548 448 ntBASIC15.35■□□□□ 0.05
HLA-DRAP01903 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 MEG3_2.1-201ENST00000611456 105 ntBASIC15.35■□□□□ 0.05
HLA-DRAP01903 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 AL590824.1-201ENST00000403828 1349 ntBASIC15.35■□□□□ 0.05
HLA-DRAP01903 FRMPD2B-201ENST00000431305 1347 ntBASIC15.35■□□□□ 0.05
HLA-DRAP01903 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRAP01903 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRAP01903 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 OR8T1P-201ENST00000421347 918 ntBASIC15.34■□□□□ 0.05
HLA-DRAP01903 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 DUX4L50-201ENST00000455245 715 ntBASIC15.34■□□□□ 0.05
HLA-DRAP01903 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRAP01903 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRAP01903 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
HLA-DRAP01903 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DRAP01903 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DRAP01903 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DRAP01903 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.33■□□□□ 0.05
HLA-DRAP01903 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.33■□□□□ 0.05
HLA-DRAP01903 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DRAP01903 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.33■□□□□ 0.04
HLA-DRAP01903 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRAP01903 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRAP01903 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DRAP01903 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRAP01903 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DRAP01903 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRAP01903 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HLA-DRAP01903 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms