Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 NAP1L6-202ENST00000641404 1222 ntBASIC11.07□□□□□ -0.64
TRBV12-3P01733 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 LINC00115-201ENST00000473798 1317 ntBASIC11.07□□□□□ -0.64
TRBV12-3P01733 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRBV12-3P01733 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRBV12-3P01733 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 AC041040.2-201ENST00000622926 2899 ntBASIC11.06□□□□□ -0.64
TRBV12-3P01733 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 AC011474.4-201ENST00000623523 2076 ntBASIC11.06□□□□□ -0.64
TRBV12-3P01733 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 RNA5SP359-201ENST00000364838 113 ntBASIC11.06□□□□□ -0.64
TRBV12-3P01733 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 REEP1-202ENST00000453231 940 ntTSL 2 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 RN7SL11P-201ENST00000471305 293 ntBASIC11.06□□□□□ -0.64
TRBV12-3P01733 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 CCNC-217ENST00000523985 958 ntTSL 2 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 AC090857.1-201ENST00000527400 390 ntBASIC11.06□□□□□ -0.64
TRBV12-3P01733 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 RN7SL774P-201ENST00000577467 290 ntBASIC11.06□□□□□ -0.64
TRBV12-3P01733 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 AL365181.3-201ENST00000605886 3222 ntBASIC11.06□□□□□ -0.64
TRBV12-3P01733 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC11.06□□□□□ -0.64
TRBV12-3P01733 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRBV12-3P01733 AC111170.3-201ENST00000624282 2464 ntBASIC11.06□□□□□ -0.64
TRBV12-3P01733 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRBV12-3P01733 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRBV12-3P01733 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.05□□□□□ -0.64
TRBV12-3P01733 AC015909.3-201ENST00000572855 1794 ntBASIC11.05□□□□□ -0.64
TRBV12-3P01733 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRBV12-3P01733 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRBV12-3P01733 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.05□□□□□ -0.64
TRBV12-3P01733 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.05□□□□□ -0.64
TRBV12-3P01733 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
TRBV12-3P01733 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
TRBV12-3P01733 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRBV12-3P01733 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRBV12-3P01733 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRBV12-3P01733 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRBV12-3P01733 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRBV12-3P01733 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRBV12-3P01733 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms