Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.81□□□□□ -0.36
CNOT4O95628 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.81□□□□□ -0.36
CNOT4O95628 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.81□□□□□ -0.36
CNOT4O95628 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.81□□□□□ -0.36
CNOT4O95628 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.81□□□□□ -0.36
CNOT4O95628 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.81□□□□□ -0.36
CNOT4O95628 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.81□□□□□ -0.36
CNOT4O95628 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.81□□□□□ -0.36
CNOT4O95628 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CNOT4O95628 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 MIR3188-201ENST00000583494 85 ntBASIC12.81□□□□□ -0.36
CNOT4O95628 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.81□□□□□ -0.36
CNOT4O95628 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 AL591471.1-201ENST00000621855 229 ntBASIC12.81□□□□□ -0.36
CNOT4O95628 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 AC113367.3-201ENST00000508316 1912 ntBASIC12.81□□□□□ -0.36
CNOT4O95628 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 AC136759.1-202ENST00000530858 2194 ntBASIC12.81□□□□□ -0.36
CNOT4O95628 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CNOT4O95628 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 MTHFR-210ENST00000641407 2387 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 AL157791.1-201ENST00000553667 1699 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.8□□□□□ -0.36
CNOT4O95628 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CNOT4O95628 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 AC091046.1-201ENST00000331871 207 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CNOT4O95628 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CNOT4O95628 KRT18P36-201ENST00000411618 1276 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.8□□□□□ -0.36
CNOT4O95628 FTLP1-201ENST00000449155 526 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 PGAM1P5-201ENST00000548011 764 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 AL161670.2-201ENST00000557650 1227 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.8□□□□□ -0.36
CNOT4O95628 AC124068.2-201ENST00000569473 1109 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 AC021016.3-201ENST00000608367 477 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 MIR7845-201ENST00000618396 99 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms