Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
KDELR3O43731 AL807761.2-201ENST00000422849 729 ntBASIC14.43□□□□□ -0.1
KDELR3O43731 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.43□□□□□ -0.1
KDELR3O43731 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KDELR3O43731 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.43□□□□□ -0.1
KDELR3O43731 MIR3907-201ENST00000579424 151 ntBASIC14.43□□□□□ -0.1
KDELR3O43731 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KDELR3O43731 AC007326.1-201ENST00000604539 458 ntBASIC14.43□□□□□ -0.1
KDELR3O43731 AC106872.11-201ENST00000605838 421 ntBASIC14.43□□□□□ -0.1
KDELR3O43731 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.43□□□□□ -0.1
KDELR3O43731 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.43□□□□□ -0.1
KDELR3O43731 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.43□□□□□ -0.1
KDELR3O43731 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.43□□□□□ -0.1
KDELR3O43731 AC068760.1-201ENST00000493579 1953 ntBASIC14.43□□□□□ -0.1
KDELR3O43731 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.43□□□□□ -0.1
KDELR3O43731 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
KDELR3O43731 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
KDELR3O43731 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
KDELR3O43731 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 RCC2P1-201ENST00000452257 1476 ntBASIC14.43□□□□□ -0.1
KDELR3O43731 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
KDELR3O43731 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KDELR3O43731 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.43□□□□□ -0.1
KDELR3O43731 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.43□□□□□ -0.1
KDELR3O43731 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
KDELR3O43731 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
KDELR3O43731 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
KDELR3O43731 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
KDELR3O43731 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
KDELR3O43731 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
KDELR3O43731 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 AL591122.2-201ENST00000624125 1853 ntBASIC14.42□□□□□ -0.1
KDELR3O43731 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.42□□□□□ -0.1
KDELR3O43731 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 GRK6P1-201ENST00000400595 1711 ntBASIC14.42□□□□□ -0.1
KDELR3O43731 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 AL627231.1-201ENST00000394467 1125 ntBASIC14.42□□□□□ -0.1
KDELR3O43731 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.42□□□□□ -0.1
KDELR3O43731 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.42□□□□□ -0.1
KDELR3O43731 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.42□□□□□ -0.1
KDELR3O43731 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.42□□□□□ -0.1
KDELR3O43731 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.42□□□□□ -0.1
KDELR3O43731 IGLV3-15-201ENST00000518356 244 ntBASIC14.42□□□□□ -0.1
KDELR3O43731 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.42□□□□□ -0.1
KDELR3O43731 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.42□□□□□ -0.1
KDELR3O43731 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.42□□□□□ -0.1
KDELR3O43731 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
KDELR3O43731 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.42□□□□□ -0.1
KDELR3O43731 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 KRT8P19-201ENST00000551916 1455 ntBASIC14.42□□□□□ -0.1
KDELR3O43731 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
KDELR3O43731 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
KDELR3O43731 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
KDELR3O43731 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KDELR3O43731 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
KDELR3O43731 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.41□□□□□ -0.1
KDELR3O43731 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KDELR3O43731 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.41□□□□□ -0.1
KDELR3O43731 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms