Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 MPV17-209ENST00000405983 859 ntTSL 5 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 METTL7AP1-201ENST00000547343 496 ntBASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 MED11-202ENST00000573708 802 ntTSL 2 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 NAA38-204ENST00000575208 529 ntTSL 3 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 CSTP2-201ENST00000610599 398 ntBASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 BX322534.1-201ENST00000635574 241 ntBASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 AC215524.1-201ENST00000635696 241 ntBASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 AC110057.1-201ENST00000636031 898 ntBASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SHANK2Q9UPX8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 AC046158.3-201ENST00000624947 2558 ntBASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 AC010900.1-201ENST00000449849 1296 ntBASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 HIST1H2APS2-201ENST00000454426 370 ntBASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 RN7SL846P-201ENST00000467429 292 ntBASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 HNRNPA3P6-201ENST00000472163 1006 ntBASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 PRMT1P1-201ENST00000604252 1009 ntBASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 KF455155.1-201ENST00000604493 303 ntBASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SHANK2Q9UPX8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SHANK2Q9UPX8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 OR7E155P-201ENST00000412208 1014 ntBASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 CD37-203ENST00000426897 1204 ntTSL 2 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 VENTXP4-201ENST00000449029 958 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms