Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 AC069218.1-201ENST00000435269 762 ntBASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 C8orf49-201ENST00000525043 1968 ntBASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 MIR4754-201ENST00000582477 89 ntBASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 CYP4F23P-201ENST00000593402 1579 ntBASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 FGFR3P1-201ENST00000449999 601 ntBASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 AC008723.1-201ENST00000506922 207 ntBASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 MIR5572-201ENST00000583188 137 ntBASIC13.25□□□□□ -0.29
NPIPA1Q9UND3 MIR7845-201ENST00000618396 99 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms