Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AC018629.1-201ENST00000623381 1736 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AC006504.5-208ENST00000588784 2401 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AL590440.2-201ENST00000641973 1595 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 RPS2P36-201ENST00000456516 831 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AC019193.1-201ENST00000506678 823 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 MIR4706-201ENST00000582134 82 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 MIR3188-201ENST00000583494 85 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 MIR6769A-201ENST00000617340 73 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 LINC01230-201ENST00000625222 3017 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 KRT8P28-201ENST00000433288 1390 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 FAM90A2P-201ENST00000511144 1395 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 FAM90A25P-201ENST00000528404 1395 ntBASIC14.32□□□□□ -0.12
SPASTQ9UBP0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPASTQ9UBP0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 MIR33B-201ENST00000385104 96 ntBASIC14.31□□□□□ -0.12
SPASTQ9UBP0 TSPY25P-201ENST00000429463 745 ntBASIC14.31□□□□□ -0.12
SPASTQ9UBP0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 MIR4722-201ENST00000578292 60 ntBASIC14.31□□□□□ -0.12
SPASTQ9UBP0 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 LINC01783-202ENST00000614408 828 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms