Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 AL008707.1-201ENST00000422498 534 ntBASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 AC245884.6-201ENST00000515672 1067 ntBASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 PGAM1P5-201ENST00000548011 764 ntBASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 AC013355.1-201ENST00000562625 723 ntBASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 AL928921.2-201ENST00000641325 2442 ntBASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 RN7SL720P-201ENST00000488178 304 ntBASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 CHMP4BP1-201ENST00000556017 588 ntBASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CUEDC1Q9NWM3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms