Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 MBP-227ENST00000526111 581 ntTSL 4 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CBX3P7-201ENST00000532876 502 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 MIR3188-201ENST00000583494 85 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC103810.10-201ENST00000606504 343 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC009084.3-201ENST00000623356 437 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC127024.7-201ENST00000625101 200 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 KRT18P9-201ENST00000604826 1300 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AL157996.1-201ENST00000624684 2299 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 KRT8P31-201ENST00000504812 1408 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 FLJ16779-201ENST00000612722 7638 ntBASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
KRTAP4-3Q9BYR4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms