Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 CLUHP2-201ENST00000426660 1303 ntBASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 FKBP4P6-201ENST00000457486 1332 ntBASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 AGAP10P-201ENST00000454844 2418 ntBASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AL391825.1-201ENST00000457671 1364 ntBASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 CSPG4P11-201ENST00000560634 4910 ntBASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AC087499.6-201ENST00000411576 835 ntBASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AC004945.1-201ENST00000416738 983 ntBASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AC098850.1-201ENST00000419919 790 ntBASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AL162726.2-201ENST00000438986 1017 ntBASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AC022137.2-201ENST00000503482 481 ntBASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 CLUHP6-201ENST00000580789 941 ntBASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AL590440.2-201ENST00000641973 1595 ntBASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 BX324167.2-201ENST00000623717 3316 ntBASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMSS1Q9BQ75 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
CMSS1Q9BQ75 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CMSS1Q9BQ75 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
CMSS1Q9BQ75 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CMSS1Q9BQ75 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
CMSS1Q9BQ75 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.33□□□□□ -0.43
CMSS1Q9BQ75 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CMSS1Q9BQ75 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms