Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LY6E-215ENST00000523847 427 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN18Q99952 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN18Q99952 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PTPN18Q99952 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 AC013268.4-201ENST00000637413 2228 ntBASIC16.03■□□□□ 0.16
PTPN18Q99952 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 AC006486.2-201ENST00000624246 2199 ntBASIC16.03■□□□□ 0.16
PTPN18Q99952 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN18Q99952 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN18Q99952 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN18Q99952 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN18Q99952 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN18Q99952 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN18Q99952 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN18Q99952 KRT18P44-201ENST00000416086 1285 ntBASIC16.02■□□□□ 0.16
PTPN18Q99952 AL359092.2-201ENST00000423330 585 ntBASIC16.02■□□□□ 0.16
PTPN18Q99952 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN18Q99952 PSME2P2-201ENST00000453033 700 ntBASIC16.02■□□□□ 0.16
PTPN18Q99952 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN18Q99952 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN18Q99952 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN18Q99952 MIR6125-201ENST00000618986 96 ntBASIC16.02■□□□□ 0.16
PTPN18Q99952 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.02■□□□□ 0.16
PTPN18Q99952 AC005865.2-202ENST00000635814 725 ntBASIC16.02■□□□□ 0.16
PTPN18Q99952 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN18Q99952 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN18Q99952 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN18Q99952 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN18Q99952 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN18Q99952 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PTPN18Q99952 DBET-201ENST00000630918 3363 ntBASIC16.02■□□□□ 0.15
PTPN18Q99952 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN18Q99952 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN18Q99952 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.02■□□□□ 0.15
PTPN18Q99952 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN18Q99952 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.15
PTPN18Q99952 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC16.01■□□□□ 0.15
PTPN18Q99952 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN18Q99952 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN18Q99952 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN18Q99952 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 AL139158.3-201ENST00000641212 1562 ntBASIC16.01■□□□□ 0.15
PTPN18Q99952 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN18Q99952 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN18Q99952 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
PTPN18Q99952 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN18Q99952 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC16.01■□□□□ 0.15
PTPN18Q99952 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN18Q99952 AP000533.1-201ENST00000456143 1177 ntBASIC16.01■□□□□ 0.15
PTPN18Q99952 AC112250.1-201ENST00000504640 745 ntBASIC16.01■□□□□ 0.15
PTPN18Q99952 CD44-224ENST00000526669 870 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN18Q99952 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC16.01■□□□□ 0.15
PTPN18Q99952 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 FAM187B2P-201ENST00000577135 713 ntBASIC16.01■□□□□ 0.15
PTPN18Q99952 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 AC026120.2-201ENST00000617239 309 ntBASIC16.01■□□□□ 0.15
PTPN18Q99952 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN18Q99952 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN18Q99952 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms